{"id":171063,"date":"2012-11-20T10:40:57","date_gmt":"2012-11-20T10:40:57","guid":{"rendered":"https:\/\/www.microsoft.com\/en-us\/research\/project\/snap-sequence-aligner\/"},"modified":"2020-03-13T10:04:14","modified_gmt":"2020-03-13T17:04:14","slug":"snap-sequence-aligner","status":"publish","type":"msr-project","link":"https:\/\/www.microsoft.com\/en-us\/research\/project\/snap-sequence-aligner\/","title":{"rendered":"SNAP Sequence Aligner"},"content":{"rendered":"<div class=\"asset-content\">\n<p>SNAP is a new sequence aligner that is 10-100x faster and simultaneously more accurate than existing tools like BWA, Bowtie2 and SOAP2. It runs on commodity x86 processors, and supports a rich error model that lets it cheaply match reads with more differences from the reference than other tools.<\/p>\n<p>SNAP was developed by a team from the UC Berkeley AMP Lab, Microsoft, and UCSF.<\/p>\n<p><a class=\"msr-external-link glyph-append glyph-append-open-in-new-tab glyph-append-xsmall\" href=\"http:\/\/github.com\/downloads\/amplab\/snap\" target=\"_blank\" rel=\"noopener noreferrer\">Binaries are available on GitHub ><span class=\"sr-only\"> (opens in new tab)<\/span><\/a><\/p>\n<\/div>\n<p><!-- .asset-content --><\/p>\n","protected":false},"excerpt":{"rendered":"<p>SNAP is a new sequence aligner that is 10-100x faster and simultaneously more accurate than existing tools like BWA, Bowtie2 and SOAP2.<\/p>\n","protected":false},"featured_media":0,"template":"","meta":{"msr-url-field":"","msr-podcast-episode":"","msrModifiedDate":"","msrModifiedDateEnabled":false,"ep_exclude_from_search":false,"_classifai_error":"","footnotes":""},"research-area":[13546],"msr-locale":[268875],"msr-impact-theme":[],"msr-pillar":[],"class_list":["post-171063","msr-project","type-msr-project","status-publish","hentry","msr-research-area-computational-sciences-mathematics","msr-locale-en_us","msr-archive-status-active"],"msr_project_start":"2012-11-20","related-publications":[163921],"related-downloads":[],"related-videos":[188156,188488],"related-groups":[],"related-events":[],"related-opportunities":[],"related-posts":[],"related-articles":[],"tab-content":[],"slides":[],"related-researchers":[],"msr_research_lab":[199565],"msr_impact_theme":[],"_links":{"self":[{"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-project\/171063","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-project"}],"about":[{"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/types\/msr-project"}],"version-history":[{"count":4,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-project\/171063\/revisions"}],"predecessor-version":[{"id":643020,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-project\/171063\/revisions\/643020"}],"wp:attachment":[{"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/media?parent=171063"}],"wp:term":[{"taxonomy":"msr-research-area","embeddable":true,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/research-area?post=171063"},{"taxonomy":"msr-locale","embeddable":true,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-locale?post=171063"},{"taxonomy":"msr-impact-theme","embeddable":true,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-impact-theme?post=171063"},{"taxonomy":"msr-pillar","embeddable":true,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-pillar?post=171063"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}