Naoto Usuyama

BiomedParse: a biomedical foundation model for image parsing of everything everywhere all at once

Theodore Zhao, Yu Gu, Jianwei Yang, Naoto Usuyama, Ho Hin Lee, Tristan Naumann, Jianfeng Gao, Angela Crabtree, B. Piening, Carlo Bifulco, Mu-Hsin Wei, Hoifung Poon, Sheng Wang

June 2024

DOI

A whole-slide foundation model for digital pathology from real-world data

Hanwen Xu, Naoto Usuyama, Jaspreet Bagga, Sheng Zhang, Rajesh Rao, Tristan Naumann, Cliff Wong, Zelalem Gero, Javier González, Yu Gu, Yanbo Xu, Mu-Hsin Wei, Wenhui Wang, Shuming Ma, Furu Wei, Jianwei Yang, Chunyuan Li, Jianfeng Gao, Jaylen Rosemon, Tucker Bower, Soohee Lee, R. Weerasinghe, Bill Wright, Ari Robicsek, Brian Piening, Carlo Bifulco, Sheng Wang, Hoifung Poon

Nature | May 2024

Publication DOI Publication

Towards a clinically accessible radiology foundation model: open-access and lightweight, with automated evaluation

Juan Manuel Zambrano Chaves, Shih-Cheng Huang, Yanbo Xu, Hanwen Xu, Naoto Usuyama (naotous), Sheng Zhang, Fei Wang, Yujia Xie, Mahmoud Khademi, Ziyi Yang, Hany Hassan Awadalla, Julia Gong, Houdong Hu, Jianwei Yang, Chunyuan Li, Jianfeng Gao, Yu Gu, Cliff Wong, Mu-Hsin Wei, Tristan Naumann, Muhao Chen, Matthew P Lungren, Serena Yeung-Levy, Curtis P. Langlotz, Sheng Wang, Hoifung Poon

March 2024

Publication

BiomedCLIP: a multimodal biomedical foundation model pretrained from fifteen million scientific image-text pairs

Sheng Zhang, Yanbo Xu, Naoto Usuyama, Hanwen Xu, Jaspreet Bagga, Rob Tinn, Sam Preston, Rajesh Rao, Mu Wei, Naveen Valluri, Cliff Wong, Andrea Tupini, Yu Wang, Matt Mazzola, Swadheen Shukla, Lars Liden, Jianfeng Gao, Matthew P Lungren, Tristan Naumann, Sheng Wang, Hoifung Poon

January 2024

Publication

When an Image is Worth 1,024 x 1,024 Words: A Case Study in Computational Pathology

Wenhui Wang, Shuming Ma, Hanwen Xu, Naoto Usuyama, Jiayu Ding, Hoifung Poon, Furu Wei

December 2023

DOI Publication Publication

Can Generalist Foundation Models Outcompete Special-Purpose Tuning? Case Study in Medicine

Harsha Nori, Yin Tat Lee, Sheng Zhang, Dean Carignan, Richard Edgar, Nicolo Fusi, Nicholas King, Jonathan Larson, Yuanzhi Li, Weishung Liu, Renqian Luo, Scott Mayer McKinney, Robert Osazuwa Ness, Hoifung Poon, Tao Qin, Naoto Usuyama, Chris White, Eric Horvitz

November 2023

Publication

Exploring the Boundaries of GPT-4 in Radiology

Qianchu Liu, Stephanie Hyland, Shruthi Bannur, Kenza Bouzid, Daniel Coelho de Castro, Maria Teodora Wetscherek, Robert Tinn, Harshita Sharma, Fernando Pérez-García, Anton Schwaighofer, Pranav Rajpurkar, Sameer Tajdin Khanna, Hoifung Poon, Naoto Usuyama, Anja Thieme, Aditya Nori, Matthew P Lungren, Ozan Oktay, Javier Alvarez-Valle

EMNLP 2023 | October 2023

PDF Publication Project

BiomedJourney: Counterfactual Biomedical Image Generation by Instruction-Learning from Multimodal Patient Journeys

Yu Gu, Jianwei Yang, Naoto Usuyama, Chunyuan Li, Sheng Zhang, Matthew P Lungren, Jianfeng Gao, Hoifung Poon

October 2023

Publication

Scaling Clinical Trial Matching Using Large Language Models: A Case Study in Oncology

Cliff Wong, Sheng Zhang, Yu Gu, Christine Moung, Jacob Abel, Naoto Usuyama, Roshanthi Weerasinghe, Brian Piening, Tristan Naumann, Carlo Bifulco, Hoifung Poon

August 2023

Publication

Distilling Large Language Models for Biomedical Knowledge Extraction: A Case Study on Adverse Drug Events

Yu Gu, Sheng Zhang, Naoto Usuyama, Yonas Woldesenbet, Cliff Wong, Praneeth Sanapathi, Mu Wei, Naveen Valluri, Erika Strandberg, Tristan Naumann, Hoifung Poon

July 2023

Publication

Large-Scale Domain-Specific Pretraining for Biomedical Vision-Language Processing

Sheng Zhang, Yanbo Xu, Naoto Usuyama, Jaspreet Bagga, Robert Tinn, Sam Preston, Rajesh Rao, Mu Wei, Naveen Valluri, Cliff Wong, Matthew P Lungren, Tristan Naumann, Hoifung Poon

March 2023

Publication

Making the Most of Text Semantics to Improve Biomedical Vision-Language Processing

Benedikt Boecking, Naoto Usuyama, Shruthi Bannur, Daniel Coelho de Castro, Anton Schwaighofer, Stephanie Hyland, Maria Teodora Wetscherek, Tristan Naumann, Aditya Nori, Javier Alvarez-Valle, Hoifung Poon, Ozan Oktay

The European Conference on Computer Vision (ECCV) | October 2022

Preprint Video Download Download Project

Modular Self-Supervision for Document-Level Relation Extraction

Sheng Zhang, Cliff Wong, Naoto Usuyama, Sarthak Jain, Tristan Naumann, Hoifung Poon

2021 Empirical Methods in Natural Language Processing | September 2021

Publication PDF

Domain-Specific Pretraining for Vertical Search: Case Study on Biomedical Literature

Yu Wang, Jinchao Li, Tristan Naumann, Chenyan Xiong, Hao Cheng, Rob Tinn, Cliff Wong, Naoto Usuyama, Rick Rogahn, Zhihong Shen, Yang Qin, Eric Horvitz, Paul Bennett, Jianfeng Gao, Hoifung Poon

KDD 2021 | August 2021

Publication Publication Project

Domain-Specific Language Model Pretraining for Biomedical Natural Language Processing

Yu Gu, Robert Tinn, Hao Cheng, Michael Lucas, Naoto Usuyama, Xiaodong Liu, Tristan Naumann, Jianfeng Gao, Hoifung Poon

August 2020

PDF Video Download

ePillID Dataset: A Low-Shot Fine-Grained Benchmark for Pill Identification

Naoto Usuyama, Natalia Larios Delgado, Amanda K. Hall, Jessica Lundin

CVPR 2020 | June 2020

Publication PDF

Fast and accurate medication identification

Natalia Larios Delgado, Naoto Usuyama, Amanda K. Hall, Rebecca J. Hazen, Max Ma, Siva Sahu , Jessica Lundin

Nature Digital Medicine | February 2019

Publication

A whole-slide foundation model for digital pathology from real-world data

Hanwen Xu, Naoto Usuyama, Jaspreet Bagga, Sheng Zhang, Rajesh Rao, Tristan Naumann, Cliff Wong, Zelalem Gero, Javier González, Yu Gu, Yanbo Xu, Mu-Hsin Wei, Wenhui Wang, Shuming Ma, Furu Wei, Jianwei Yang, Chunyuan Li, Jianfeng Gao, Jaylen Rosemon, Tucker Bower, Soohee Lee, R. Weerasinghe, Bill Wright, Ari Robicsek, Brian Piening, Carlo Bifulco, Sheng Wang, Hoifung Poon

Nature | May 2024

Publication DOI Publication

Towards a clinically accessible radiology foundation model: open-access and lightweight, with automated evaluation

Juan Manuel Zambrano Chaves, Shih-Cheng Huang, Yanbo Xu, Hanwen Xu, Naoto Usuyama (naotous), Sheng Zhang, Fei Wang, Yujia Xie, Mahmoud Khademi, Ziyi Yang, Hany Hassan Awadalla, Julia Gong, Houdong Hu, Jianwei Yang, Chunyuan Li, Jianfeng Gao, Yu Gu, Cliff Wong, Mu-Hsin Wei, Tristan Naumann, Muhao Chen, Matthew P Lungren, Serena Yeung-Levy, Curtis P. Langlotz, Sheng Wang, Hoifung Poon

March 2024

Publication

When an Image is Worth 1,024 x 1,024 Words: A Case Study in Computational Pathology

Wenhui Wang, Shuming Ma, Hanwen Xu, Naoto Usuyama, Jiayu Ding, Hoifung Poon, Furu Wei

December 2023

DOI Publication Publication

Can Generalist Foundation Models Outcompete Special-Purpose Tuning? Case Study in Medicine

Harsha Nori, Yin Tat Lee, Sheng Zhang, Dean Carignan, Richard Edgar, Nicolo Fusi, Nicholas King, Jonathan Larson, Yuanzhi Li, Weishung Liu, Renqian Luo, Scott Mayer McKinney, Robert Osazuwa Ness, Hoifung Poon, Tao Qin, Naoto Usuyama, Chris White, Eric Horvitz

November 2023

Publication

Exploring the Boundaries of GPT-4 in Radiology

Qianchu Liu, Stephanie Hyland, Shruthi Bannur, Kenza Bouzid, Daniel Coelho de Castro, Maria Teodora Wetscherek, Robert Tinn, Harshita Sharma, Fernando Pérez-García, Anton Schwaighofer, Pranav Rajpurkar, Sameer Tajdin Khanna, Hoifung Poon, Naoto Usuyama, Anja Thieme, Aditya Nori, Matthew P Lungren, Ozan Oktay, Javier Alvarez-Valle

EMNLP 2023 | October 2023

PDF Publication Project

Distilling Large Language Models for Biomedical Knowledge Extraction: A Case Study on Adverse Drug Events

Yu Gu, Sheng Zhang, Naoto Usuyama, Yonas Woldesenbet, Cliff Wong, Praneeth Sanapathi, Mu Wei, Naveen Valluri, Erika Strandberg, Tristan Naumann, Hoifung Poon

July 2023

Publication

Large-Scale Domain-Specific Pretraining for Biomedical Vision-Language Processing

Sheng Zhang, Yanbo Xu, Naoto Usuyama, Jaspreet Bagga, Robert Tinn, Sam Preston, Rajesh Rao, Mu Wei, Naveen Valluri, Cliff Wong, Matthew P Lungren, Tristan Naumann, Hoifung Poon

March 2023

Publication

Making the Most of Text Semantics to Improve Biomedical Vision-Language Processing

Benedikt Boecking, Naoto Usuyama, Shruthi Bannur, Daniel Coelho de Castro, Anton Schwaighofer, Stephanie Hyland, Maria Teodora Wetscherek, Tristan Naumann, Aditya Nori, Javier Alvarez-Valle, Hoifung Poon, Ozan Oktay

The European Conference on Computer Vision (ECCV) | October 2022

Preprint Video Download Download Project

Domain-Specific Pretraining for Vertical Search: Case Study on Biomedical Literature

Yu Wang, Jinchao Li, Tristan Naumann, Chenyan Xiong, Hao Cheng, Rob Tinn, Cliff Wong, Naoto Usuyama, Rick Rogahn, Zhihong Shen, Yang Qin, Eric Horvitz, Paul Bennett, Jianfeng Gao, Hoifung Poon

KDD 2021 | August 2021

Publication Publication Project

Fast and accurate medication identification

Natalia Larios Delgado, Naoto Usuyama, Amanda K. Hall, Rebecca J. Hazen, Max Ma, Siva Sahu , Jessica Lundin

Nature Digital Medicine | February 2019

Publication

A whole-slide foundation model for digital pathology from real-world data

Hanwen Xu, Naoto Usuyama, Jaspreet Bagga, Sheng Zhang, Rajesh Rao, Tristan Naumann, Cliff Wong, Zelalem Gero, Javier González, Yu Gu, Yanbo Xu, Mu-Hsin Wei, Wenhui Wang, Shuming Ma, Furu Wei, Jianwei Yang, Chunyuan Li, Jianfeng Gao, Jaylen Rosemon, Tucker Bower, Soohee Lee, R. Weerasinghe, Bill Wright, Ari Robicsek, Brian Piening, Carlo Bifulco, Sheng Wang, Hoifung Poon

Nature | May 2024

Publication DOI Publication

Towards a clinically accessible radiology foundation model: open-access and lightweight, with automated evaluation

Juan Manuel Zambrano Chaves, Shih-Cheng Huang, Yanbo Xu, Hanwen Xu, Naoto Usuyama (naotous), Sheng Zhang, Fei Wang, Yujia Xie, Mahmoud Khademi, Ziyi Yang, Hany Hassan Awadalla, Julia Gong, Houdong Hu, Jianwei Yang, Chunyuan Li, Jianfeng Gao, Yu Gu, Cliff Wong, Mu-Hsin Wei, Tristan Naumann, Muhao Chen, Matthew P Lungren, Serena Yeung-Levy, Curtis P. Langlotz, Sheng Wang, Hoifung Poon

March 2024

Publication

When an Image is Worth 1,024 x 1,024 Words: A Case Study in Computational Pathology

Wenhui Wang, Shuming Ma, Hanwen Xu, Naoto Usuyama, Jiayu Ding, Hoifung Poon, Furu Wei

December 2023

DOI Publication Publication

Can Generalist Foundation Models Outcompete Special-Purpose Tuning? Case Study in Medicine

Harsha Nori, Yin Tat Lee, Sheng Zhang, Dean Carignan, Richard Edgar, Nicolo Fusi, Nicholas King, Jonathan Larson, Yuanzhi Li, Weishung Liu, Renqian Luo, Scott Mayer McKinney, Robert Osazuwa Ness, Hoifung Poon, Tao Qin, Naoto Usuyama, Chris White, Eric Horvitz

November 2023

Publication

Exploring the Boundaries of GPT-4 in Radiology

Qianchu Liu, Stephanie Hyland, Shruthi Bannur, Kenza Bouzid, Daniel Coelho de Castro, Maria Teodora Wetscherek, Robert Tinn, Harshita Sharma, Fernando Pérez-García, Anton Schwaighofer, Pranav Rajpurkar, Sameer Tajdin Khanna, Hoifung Poon, Naoto Usuyama, Anja Thieme, Aditya Nori, Matthew P Lungren, Ozan Oktay, Javier Alvarez-Valle

EMNLP 2023 | October 2023

PDF Publication Project

Scaling Clinical Trial Matching Using Large Language Models: A Case Study in Oncology

Cliff Wong, Sheng Zhang, Yu Gu, Christine Moung, Jacob Abel, Naoto Usuyama, Roshanthi Weerasinghe, Brian Piening, Tristan Naumann, Carlo Bifulco, Hoifung Poon

August 2023

Publication

Distilling Large Language Models for Biomedical Knowledge Extraction: A Case Study on Adverse Drug Events

Yu Gu, Sheng Zhang, Naoto Usuyama, Yonas Woldesenbet, Cliff Wong, Praneeth Sanapathi, Mu Wei, Naveen Valluri, Erika Strandberg, Tristan Naumann, Hoifung Poon

July 2023

Publication

Large-Scale Domain-Specific Pretraining for Biomedical Vision-Language Processing

Sheng Zhang, Yanbo Xu, Naoto Usuyama, Jaspreet Bagga, Robert Tinn, Sam Preston, Rajesh Rao, Mu Wei, Naveen Valluri, Cliff Wong, Matthew P Lungren, Tristan Naumann, Hoifung Poon

March 2023

Publication

Making the Most of Text Semantics to Improve Biomedical Vision-Language Processing

Benedikt Boecking, Naoto Usuyama, Shruthi Bannur, Daniel Coelho de Castro, Anton Schwaighofer, Stephanie Hyland, Maria Teodora Wetscherek, Tristan Naumann, Aditya Nori, Javier Alvarez-Valle, Hoifung Poon, Ozan Oktay

The European Conference on Computer Vision (ECCV) | October 2022

Preprint Video Download Download Project

Modular Self-Supervision for Document-Level Relation Extraction

Sheng Zhang, Cliff Wong, Naoto Usuyama, Sarthak Jain, Tristan Naumann, Hoifung Poon

2021 Empirical Methods in Natural Language Processing | September 2021

Publication PDF

Domain-Specific Pretraining for Vertical Search: Case Study on Biomedical Literature

Yu Wang, Jinchao Li, Tristan Naumann, Chenyan Xiong, Hao Cheng, Rob Tinn, Cliff Wong, Naoto Usuyama, Rick Rogahn, Zhihong Shen, Yang Qin, Eric Horvitz, Paul Bennett, Jianfeng Gao, Hoifung Poon

KDD 2021 | August 2021

Publication Publication Project

Domain-Specific Language Model Pretraining for Biomedical Natural Language Processing

Yu Gu, Robert Tinn, Hao Cheng, Michael Lucas, Naoto Usuyama, Xiaodong Liu, Tristan Naumann, Jianfeng Gao, Hoifung Poon

August 2020

PDF Video Download

Fast and accurate medication identification

Natalia Larios Delgado, Naoto Usuyama, Amanda K. Hall, Rebecca J. Hazen, Max Ma, Siva Sahu , Jessica Lundin

Nature Digital Medicine | February 2019

Publication

BiomedParse: a biomedical foundation model for image parsing of everything everywhere all at once

Theodore Zhao, Yu Gu, Jianwei Yang, Naoto Usuyama, Ho Hin Lee, Tristan Naumann, Jianfeng Gao, Angela Crabtree, B. Piening, Carlo Bifulco, Mu-Hsin Wei, Hoifung Poon, Sheng Wang

June 2024

DOI

Towards a clinically accessible radiology foundation model: open-access and lightweight, with automated evaluation

Juan Manuel Zambrano Chaves, Shih-Cheng Huang, Yanbo Xu, Hanwen Xu, Naoto Usuyama (naotous), Sheng Zhang, Fei Wang, Yujia Xie, Mahmoud Khademi, Ziyi Yang, Hany Hassan Awadalla, Julia Gong, Houdong Hu, Jianwei Yang, Chunyuan Li, Jianfeng Gao, Yu Gu, Cliff Wong, Mu-Hsin Wei, Tristan Naumann, Muhao Chen, Matthew P Lungren, Serena Yeung-Levy, Curtis P. Langlotz, Sheng Wang, Hoifung Poon

March 2024

Publication

BiomedCLIP: a multimodal biomedical foundation model pretrained from fifteen million scientific image-text pairs

Sheng Zhang, Yanbo Xu, Naoto Usuyama, Hanwen Xu, Jaspreet Bagga, Rob Tinn, Sam Preston, Rajesh Rao, Mu Wei, Naveen Valluri, Cliff Wong, Andrea Tupini, Yu Wang, Matt Mazzola, Swadheen Shukla, Lars Liden, Jianfeng Gao, Matthew P Lungren, Tristan Naumann, Sheng Wang, Hoifung Poon

January 2024

Publication

BiomedJourney: Counterfactual Biomedical Image Generation by Instruction-Learning from Multimodal Patient Journeys

Yu Gu, Jianwei Yang, Naoto Usuyama, Chunyuan Li, Sheng Zhang, Matthew P Lungren, Jianfeng Gao, Hoifung Poon

October 2023

Publication

Large-Scale Domain-Specific Pretraining for Biomedical Vision-Language Processing

Sheng Zhang, Yanbo Xu, Naoto Usuyama, Jaspreet Bagga, Robert Tinn, Sam Preston, Rajesh Rao, Mu Wei, Naveen Valluri, Cliff Wong, Matthew P Lungren, Tristan Naumann, Hoifung Poon

March 2023

Publication

Making the Most of Text Semantics to Improve Biomedical Vision-Language Processing

Benedikt Boecking, Naoto Usuyama, Shruthi Bannur, Daniel Coelho de Castro, Anton Schwaighofer, Stephanie Hyland, Maria Teodora Wetscherek, Tristan Naumann, Aditya Nori, Javier Alvarez-Valle, Hoifung Poon, Ozan Oktay

The European Conference on Computer Vision (ECCV) | October 2022

Preprint Video Download Download Project

ePillID Dataset: A Low-Shot Fine-Grained Benchmark for Pill Identification

Naoto Usuyama, Natalia Larios Delgado, Amanda K. Hall, Jessica Lundin

CVPR 2020 | June 2020

Publication PDF

Modular Self-Supervision for Document-Level Relation Extraction

Sheng Zhang, Cliff Wong, Naoto Usuyama, Sarthak Jain, Tristan Naumann, Hoifung Poon

2021 Empirical Methods in Natural Language Processing | September 2021

Publication PDF

Domain-Specific Pretraining for Vertical Search: Case Study on Biomedical Literature

Yu Wang, Jinchao Li, Tristan Naumann, Chenyan Xiong, Hao Cheng, Rob Tinn, Cliff Wong, Naoto Usuyama, Rick Rogahn, Zhihong Shen, Yang Qin, Eric Horvitz, Paul Bennett, Jianfeng Gao, Hoifung Poon

KDD 2021 | August 2021

Publication Publication Project

Domain-Specific Pretraining for Vertical Search: Case Study on Biomedical Literature

Yu Wang, Jinchao Li, Tristan Naumann, Chenyan Xiong, Hao Cheng, Rob Tinn, Cliff Wong, Naoto Usuyama, Rick Rogahn, Zhihong Shen, Yang Qin, Eric Horvitz, Paul Bennett, Jianfeng Gao, Hoifung Poon

KDD 2021 | August 2021

Publication Publication Project

Towards a clinically accessible radiology foundation model: open-access and lightweight, with automated evaluation

Juan Manuel Zambrano Chaves, Shih-Cheng Huang, Yanbo Xu, Hanwen Xu, Naoto Usuyama (naotous), Sheng Zhang, Fei Wang, Yujia Xie, Mahmoud Khademi, Ziyi Yang, Hany Hassan Awadalla, Julia Gong, Houdong Hu, Jianwei Yang, Chunyuan Li, Jianfeng Gao, Yu Gu, Cliff Wong, Mu-Hsin Wei, Tristan Naumann, Muhao Chen, Matthew P Lungren, Serena Yeung-Levy, Curtis P. Langlotz, Sheng Wang, Hoifung Poon

March 2024

Publication

BiomedCLIP: a multimodal biomedical foundation model pretrained from fifteen million scientific image-text pairs

Sheng Zhang, Yanbo Xu, Naoto Usuyama, Hanwen Xu, Jaspreet Bagga, Rob Tinn, Sam Preston, Rajesh Rao, Mu Wei, Naveen Valluri, Cliff Wong, Andrea Tupini, Yu Wang, Matt Mazzola, Swadheen Shukla, Lars Liden, Jianfeng Gao, Matthew P Lungren, Tristan Naumann, Sheng Wang, Hoifung Poon

January 2024

Publication

When an Image is Worth 1,024 x 1,024 Words: A Case Study in Computational Pathology

Wenhui Wang, Shuming Ma, Hanwen Xu, Naoto Usuyama, Jiayu Ding, Hoifung Poon, Furu Wei

December 2023

DOI Publication Publication

BiomedJourney: Counterfactual Biomedical Image Generation by Instruction-Learning from Multimodal Patient Journeys

Yu Gu, Jianwei Yang, Naoto Usuyama, Chunyuan Li, Sheng Zhang, Matthew P Lungren, Jianfeng Gao, Hoifung Poon

October 2023

Publication

Large-Scale Domain-Specific Pretraining for Biomedical Vision-Language Processing

Sheng Zhang, Yanbo Xu, Naoto Usuyama, Jaspreet Bagga, Robert Tinn, Sam Preston, Rajesh Rao, Mu Wei, Naveen Valluri, Cliff Wong, Matthew P Lungren, Tristan Naumann, Hoifung Poon

March 2023

Publication

Domain-Specific Language Model Pretraining for Biomedical Natural Language Processing

Yu Gu, Robert Tinn, Hao Cheng, Michael Lucas, Naoto Usuyama, Xiaodong Liu, Tristan Naumann, Jianfeng Gao, Hoifung Poon

August 2020

PDF Video Download

BiomedParse: a biomedical foundation model for image parsing of everything everywhere all at once

Theodore Zhao, Yu Gu, Jianwei Yang, Naoto Usuyama, Ho Hin Lee, Tristan Naumann, Jianfeng Gao, Angela Crabtree, B. Piening, Carlo Bifulco, Mu-Hsin Wei, Hoifung Poon, Sheng Wang

June 2024

DOI

Can Generalist Foundation Models Outcompete Special-Purpose Tuning? Case Study in Medicine

Harsha Nori, Yin Tat Lee, Sheng Zhang, Dean Carignan, Richard Edgar, Nicolo Fusi, Nicholas King, Jonathan Larson, Yuanzhi Li, Weishung Liu, Renqian Luo, Scott Mayer McKinney, Robert Osazuwa Ness, Hoifung Poon, Tao Qin, Naoto Usuyama, Chris White, Eric Horvitz

November 2023

Publication

Scaling Clinical Trial Matching Using Large Language Models: A Case Study in Oncology

Cliff Wong, Sheng Zhang, Yu Gu, Christine Moung, Jacob Abel, Naoto Usuyama, Roshanthi Weerasinghe, Brian Piening, Tristan Naumann, Carlo Bifulco, Hoifung Poon

August 2023

Publication

Distilling Large Language Models for Biomedical Knowledge Extraction: A Case Study on Adverse Drug Events

Yu Gu, Sheng Zhang, Naoto Usuyama, Yonas Woldesenbet, Cliff Wong, Praneeth Sanapathi, Mu Wei, Naveen Valluri, Erika Strandberg, Tristan Naumann, Hoifung Poon

July 2023

Publication

A whole-slide foundation model for digital pathology from real-world data

Hanwen Xu, Naoto Usuyama, Jaspreet Bagga, Sheng Zhang, Rajesh Rao, Tristan Naumann, Cliff Wong, Zelalem Gero, Javier González, Yu Gu, Yanbo Xu, Mu-Hsin Wei, Wenhui Wang, Shuming Ma, Furu Wei, Jianwei Yang, Chunyuan Li, Jianfeng Gao, Jaylen Rosemon, Tucker Bower, Soohee Lee, R. Weerasinghe, Bill Wright, Ari Robicsek, Brian Piening, Carlo Bifulco, Sheng Wang, Hoifung Poon

Nature | May 2024

Publication DOI Publication

Fast and accurate medication identification

Natalia Larios Delgado, Naoto Usuyama, Amanda K. Hall, Rebecca J. Hazen, Max Ma, Siva Sahu , Jessica Lundin

Nature Digital Medicine | February 2019

Publication

Exploring the Boundaries of GPT-4 in Radiology

Qianchu Liu, Stephanie Hyland, Shruthi Bannur, Kenza Bouzid, Daniel Coelho de Castro, Maria Teodora Wetscherek, Robert Tinn, Harshita Sharma, Fernando Pérez-García, Anton Schwaighofer, Pranav Rajpurkar, Sameer Tajdin Khanna, Hoifung Poon, Naoto Usuyama, Anja Thieme, Aditya Nori, Matthew P Lungren, Ozan Oktay, Javier Alvarez-Valle

EMNLP 2023 | October 2023

PDF Publication Project

Making the Most of Text Semantics to Improve Biomedical Vision-Language Processing

Benedikt Boecking, Naoto Usuyama, Shruthi Bannur, Daniel Coelho de Castro, Anton Schwaighofer, Stephanie Hyland, Maria Teodora Wetscherek, Tristan Naumann, Aditya Nori, Javier Alvarez-Valle, Hoifung Poon, Ozan Oktay

The European Conference on Computer Vision (ECCV) | October 2022

Preprint Video Download Download Project

Modular Self-Supervision for Document-Level Relation Extraction

Sheng Zhang, Cliff Wong, Naoto Usuyama, Sarthak Jain, Tristan Naumann, Hoifung Poon

2021 Empirical Methods in Natural Language Processing | September 2021

Publication PDF

Domain-Specific Pretraining for Vertical Search: Case Study on Biomedical Literature

Yu Wang, Jinchao Li, Tristan Naumann, Chenyan Xiong, Hao Cheng, Rob Tinn, Cliff Wong, Naoto Usuyama, Rick Rogahn, Zhihong Shen, Yang Qin, Eric Horvitz, Paul Bennett, Jianfeng Gao, Hoifung Poon

KDD 2021 | August 2021

Publication Publication Project

ePillID Dataset: A Low-Shot Fine-Grained Benchmark for Pill Identification

Naoto Usuyama, Natalia Larios Delgado, Amanda K. Hall, Jessica Lundin

CVPR 2020 | June 2020

Publication PDF